Japan - Top 100+ Cities by Population
Population data by city is the population of the city itself, not the metro area. Data is as of 2011 estimates.
| Rank | City | Country | Population | |
|---|---|---|---|---|
| 315. | Shiki | Japan | 65,411 | |
| 658. | Shido | Japan | 22,859 | |
| 732. | Shibushi | Japan | 18,349 | |
| 402. | Shibukawa | Japan | 48,322 | |
| 681. | Shibetsu | Japan | 21,744 | |
| 263. | Shibata | Japan | 80,793 | |
| 161. | Seto | Japan | 134,246 | |
| 636. | Setaka | Japan | 23,985 | |
| 13. | Sendai-shi | Japan | 1,037,562 | |
| 285. | Sendai | Japan | 73,132 | |
| 137. | Sayama | Japan | 160,843 | |
| 407. | Sawara | Japan | 47,199 | |
| 367. | Satte | Japan | 55,286 | |
| 96. | Sasebo | Japan | 237,444 | |
| 406. | Sasayama | Japan | 47,204 | |
| 538. | Sasaguri | Japan | 32,588 | |
| 5. | Sapporo-shi | Japan | 1,883,027 | |
| 256. | Sano | Japan | 82,535 | |
| 255. | Sanjō | Japan | 82,893 | |
| 165. | Sanda | Japan | 132,858 | |
| 327. | Sakurai | Japan | 62,964 | |
| 122. | Sakura | Japan | 182,549 | |
| 296. | Saku | Japan | 68,885 | |
| 214. | Sakata | Japan | 100,446 | |
| 501. | Sakaiminato | Japan | 36,324 | |
| 358. | Sakaide | Japan | 57,090 | |
| 594. | Sakai | Japan | 26,918 | |
| 551. | Sakai | Japan | 31,268 | |
| 16. | Sakai | Japan | 782,339 | |
| 224. | Sakado | Japan | 96,656 | |
| 10. | Saitama | Japan | 1,193,350 | |
| 398. | Saiki | Japan | 49,065 | |
| 346. | Saijō | Japan | 58,823 | |
| 612. | Sagara | Japan | 25,922 | |
| 20. | Sagamihara | Japan | 648,801 | |
| 431. | Sagae | Japan | 43,544 | |
| 135. | Saga-shi | Japan | 165,236 | |
| 310. | Sabae | Japan | 66,291 | |
| 434. | Ryūō | Japan | 43,180 | |
| 248. | Ryūgasaki | Japan | 85,761 | |
| 748. | Ryōtsu | Japan | 16,359 | |
| 601. | Rumoi | Japan | 26,454 | |
| 764. | Rishiri Town | Japan | 2,684 | |
| 512. | Rifu | Japan | 35,037 | |
| 566. | Ōzu | Japan | 29,820 | |
| 480. | Ōzu | Japan | 38,833 | |
| 682. | Ōyama | Japan | 21,744 | |
| 139. | Oyama | Japan | 159,936 | |
| 676. | Owase | Japan | 22,038 | |
| 552. | Ōtsuki | Japan | 31,226 | |
| 745. | Ōtsuchi | Japan | 16,497 | |
| 72. | Ōtsu-shi | Japan | 298,164 | |
| 456. | Otofuke | Japan | 40,944 | |
| 345. | Ōtawara | Japan | 58,888 | |
| 155. | Otaru | Japan | 143,792 | |
| 563. | Ōtake | Japan | 30,151 | |
| 148. | Ōta | Japan | 152,104 | |
| 3. | Ōsaka-shi | Japan | 2,592,413 | |
| 235. | Onomichi | Japan | 90,936 | |
| 226. | Ōnojō | Japan | 94,957 | |
| 426. | Onoda | Japan | 44,295 | |
| 605. | Ōno | Japan | 26,190 | |
| 492. | Ono | Japan | 37,469 | |
| 391. | Ono | Japan | 50,230 | |
| 167. | Ōmuta | Japan | 131,974 | |
| 236. | Ōmura | Japan | 89,918 | |
| 588. | Ōmiya | Japan | 27,588 | |
| 295. | Ōmihachiman | Japan | 69,189 | |
| 616. | Omigawa | Japan | 25,763 | |
| 152. | Ōme | Japan | 149,323 | |
| 688. | Ōmama | Japan | 21,286 | |
| 481. | Ōmagari | Japan | 38,805 | |
| 559. | Ōmachi | Japan | 30,599 | |
| 515. | Okunoya | Japan | 34,627 | |
| 667. | Ōkuchi | Japan | 22,425 | |
| 178. | Okinawa | Japan | 125,483 | |
| 281. | Okegawa | Japan | 75,062 | |
| 55. | Okazaki | Japan | 352,361 | |
| 21. | Okayama-shi | Japan | 639,652 | |
| 371. | Okaya | Japan | 54,286 | |
| 649. | Ōkawara | Japan | 23,340 | |
| 475. | Ōkawa | Japan | 39,223 | |
| 461. | Ojiya | Japan | 40,549 | |
| 34. | Ōita-shi | Japan | 448,907 | |
| 537. | Ōiso | Japan | 32,595 | |
| 390. | Ōi | Japan | 50,593 | |
| 704. | Ōhara | Japan | 20,226 | |
| 644. | Ogōri | Japan | 23,516 | |
| 493. | Ogawa | Japan | 37,443 | |
| 150. | Ōgaki | Japan | 150,570 | |
| 509. | Ōfunato | Japan | 35,418 | |
| 109. | Odawara | Japan | 203,035 | |
| 319. | Ōdate | Japan | 64,543 | |
| 546. | Ōda | Japan | 31,867 | |
| 274. | Ōbu | Japan | 77,864 | |
| 422. | Obita | Japan | 45,293 | |
| 129. | Obihiro | Japan | 173,890 | |
| 692. | Obanazawa | Japan | 20,821 | |
| 531. | Obama | Japan | 32,896 | |
| 719. | Ōarai | Japan | 19,326 |